Uvrabc System Protein C

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Uvrabc System Protein C
  Conformer 1
(PDB) 		2nrv (B)
  Conformer 2
(PDB) 		2nrw (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 144 1.32   343 - 494
2 52 0.75   495 - 552

Sequence


           ________________________________________________________________________________________________________________________ 
 2nrv(B) : RGLRKEALEELMKLLNMKDFPYRIEGIDISHLQGKYTVASLVVFEDGFPKKGDYRRYKIEQDHPDDYESIRTVVKRRYSKHPLPNLLFVDGGIGQVNAAIEALKEIGKDCPVVGLAKKEE 
         :                                                                                                                          
 2nrw(A) : *GLRKEALEELMKLLNMKDFPYRIEGIDISH-----tVASLVVFEDGFPKKGDYRRYKIEQd---DYESIRTVVKRRYSKHPLPNLLFVDGGIGQVNAAIEALKEIGKDCPVVGLAKKEE 
           ________________________________________________________________________________________________________________________ 

           ________________________________494_______________________________________________________________                       
 2nrv(B) : TVVFENREIHLPHDHPVLRLLVQIRDETHRFAVSYHRKRREKESLRSVLD-vPGIGPIRKKKLIEHFGSLENIRSASLEEIARVIGSTEIARRVL***                       
         :                                                                                                                          
 2nrw(A) : TVVFENREIHLPHDHPVLRLLVQIRDETHRFAVSYHR-----eSLRSVLDNVPGIGPIRKKKLIEHFGSLENIRSASLEEIARVIGSTEIARRVLDIL                       
           ________________________________494_______________________________________________________________                       

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		123.3
Translation
(A) 		1.2
Closure
(%) 		5.0
Bending Residues
( green ) 		  494 - 502
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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