Xanthine Phosphoribosyltransferase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Xanthine Phosphoribosyltransferase
  Conformer 1
(PDB) 		1y0b (A)
  Conformer 2
(PDB) 		2fxv (A)
  Window Length 11
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 148 0.53   6 - 77   108 - 185
2 30 3.1   78 - 107

Sequence


           ____________________________________________________________________________77___________________________107____________ 
 1y0b(A) : NAeALKRKIEEEGVVLSDQVLKVDSFLNHQIDPLL-qRIGDEFASRFAKDGITKIVTIESSGIAPAV-tGLKLGVPVVFARKHKSLTLTDNLLTASVYSFTKQTESQIAVSGTHLSDQDH 
         :                                                                                                                          
 2fxv(A) : *MEALKRKIEEEGVVLSDQVLKVDSFLNHQIDPLLMQRIGDEFASRFAKDGITKIVTIESSGIAPAVMTGLKLGVPVVFARKHKSLTLTDNLLTASVYSFTKQTESQIAVSGTHLSDQDH 
           ____________________________________________________________________________77___________________________107____________ 

           ________________________________________________________________________                                                 
 1y0b(A) : VLIIDDFLANGQAAHGLVSIVKQAGASIAGIGIVIEKSFQPGRDELVKLGYRVESLARIQSLEEGKVSFVQE                                                 
         :                                                                                                                          
 2fxv(A) : VLIIDDFLANGQAAHGLVSIVKQAGASIAGIGIVIEKSFQPGRDELVKLGYRVESLARIQSLEEGKVSFVQ*                                                 
           ________________________________________________________________________                                                 

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		30.0
Translation
(A) 		0.3
Closure
(%) 		94.6
Bending Residues
( green ) 		  77 - 80
  107 - 109
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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