Yhdh

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Yhdh
  Conformer 1
(PDB) 		1o89 (A)
  Conformer 2
(PDB) 		1o8c (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 215 1.05   29 - 31   65 - 82   86 - 88   104 - 109   111 - 289   310 - 315
2 101 0.9   3 - 28   32 - 64   83 - 85   89 - 103   110 - 110   290 - 309   316 - 321

Sequence


           ________________________26____________________________________64______________80___85_______________103___109___________ 
 1o89(A) : LQALLLEQQ---tLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSEDPRFHAGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAMPQGLDARK 
         :                                                                                                                          
 1o8c(B) : LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSEDPRFHAGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAMPQGLDARK 
           ________________________26____________________________________64______________80___85_______________103___109___________ 

           ________________________________________________________________________________________________________________________ 
 1o89(A) : AMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGASRVLPRDEFAESRPLEKQVWAGAIDTVGDKVLAKVLAQMNYGGCVAAC 
         :                                                                                                                          
 1o8c(B) : AMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGASRVLPRDEFAESRPLEKQVWAGAIDTVGDKVLAKVLAQMNYGGCVAAC 
           ________________________________________________________________________________________________________________________ 

           ___________________________________________286____________________309___315_________                                     
 1o89(A) : GLAGGFTLPTTVMPFILRNVRLQGVDSVMTPPERRAQAWQRLVADLPESFYTQAAKEISLSEAPNFAEAIINNQIQGRTLVKV*                                     
         :                                                                                                                          
 1o8c(B) : GLAGGFTLPTTVMPFILRNVRLQGVDSVMTPPERRAQAWQRLVADLPESFYTQAAKEISLSEAPNFAEAIINNQIQGRTLVKVN                                     
           ___________________________________________286____________________309___315_________                                     

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		11.6
Translation
(A) 		0.0
Closure
(%) 		77.5
Bending Residues
( green ) 		  26 - 32
  64 - 68
  80 - 83
  85 - 89
  103 - 104
  109 - 111
  286 - 296
  309 - 312
  315 - 316
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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