Zinc-Alpha-2-Glycoprotein

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Zinc-Alpha-2-Glycoprotein
  Conformer 1
(PDB) 		1zag (B)
  Conformer 2
(PDB) 		1t7y (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 174 0.61   8 - 54   56 - 182
2 94 0.63   55 - 55   183 - 275

Sequence


           ________________________________________________54______________________________________________________________________ 
 1zag(B) : DGRYSLTYIYTGLSKHVEDVPAFQALGSLNDLQFFRYNSKDRKSQPMGLWRQVEGMEDWKQDSQLQKAREDIFMETLKDIVEYYNDSNGSHVLQGRFGCEIENNRSSGAFWKYYYDGKDY 
         :                                                                                                                          
 1t7y(A) : DGRYSLTYIYTGLSKHVEDVPAFQALGSLNDLQFFRYNSKDRKSQPMGLWRQVEGMEDWKQDSQLQKAREDIFMETLKDIVEYYKDSTGSHVLQGRFGCEIENNRSSGAFWKYYYDGKDY 
           ________________________________________________54______________________________________________________________________ 

           _______________________________________________________182______________________________________________________________ 
 1zag(B) : IEFNKEIPAWVPFDPAAQITKQKWEAEPVYVQRAKAYLEEECPATLRKYLKYSKNILDRQDPPSVVVTSHQAPGEKKKLKCLAYDFYPGKIDVHWTRAGEVQEPELRGDVLHNGNGTYQS 
         :                                                                                                                          
 1t7y(A) : IEFNKEIPAWVPFDPAAQITKQKWEAEPVYVQRAKAYLEEECPATLRKYLKYSKNILDRQDPPSVVVTSHQAPGEKKKLKCLAYDFYPGKIDVHWTRAGEVQEPELRGDVLHNGNGTYQS 
           _______________________________________________________182______________________________________________________________ 

           __________________________________                                                                                       
 1zag(B) : WVVVAVPPQDTAPYSCHVQHSSLAQPLVVPWEAS                                                                                       
         :                                                                                                                          
 1t7y(A) : WVVVAVPPQDTAPYSCHVQHSSLAQPLVVPWEA*                                                                                       
           __________________________________                                                                                       

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		14.1
Translation
(A) 		-0.3
Closure
(%) 		78.2
Bending Residues
( green ) 		  54 - 57
  182 - 183
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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